Package index
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create_decoding_plots() - Visualize decoded hidden states
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create_hmm_plots() - Visualize hidden Markov model results
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create_loop_plots() - Visualize the stability of HMM states and thresholds
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create_threshold_plots() - Visualize hidden Markov model and threshold results
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df_gp_be - Belgian GP workload data
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df_sari_be - Belgian SARI data
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run_hmm() - Fit a hidden Markov model (HMM) to epidemiological time series data
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run_loop_thresholds() - Stability analysis of QUEST thresholds via iterative refitting
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run_out_of_sample_decoding() - Out-of-sample state decoding using a frozen HMM
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run_threshold_computation() - Compute QUEST thresholds
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summary(<epiquest_hmm>) - Summary of hidden Markov model fit
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summary(<epiquest_loop>) - Summary of HMM stability analysis
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summary(<epiquest_thresholds>) - Summary of QUEST thresholds